Error when running flatpak update

I’m on Fedora 33, and I keep having an error about object not found when running flatpak update.

Here is the error I’m encountering:

Warning: While trying to checkout dc5cfaade1c137d475ba3e953cea44a84dbd8a4588e9b24eea7ef7aee6cfc6fa into /home/etenil/.local/share/flatpak/runtime/org.freedesktop.Platform.VAAPI.Intel/x86_64/20.08/.dc5cfaade1c137d475ba3e953cea44a84dbd8a4588e9b24eea7ef7aee6cfc6fa-N9YCW0: Opening content object fde90070d1cb81c9f1c69de520689581f3e0a04895c3c52d74fcfcc6ecadc7fe: Couldn't find file object 'fde90070d1cb81c9f1c69de520689581f3e0a04895c3c52d74fcfcc6ecadc7fe'

This is the list of packages installed:

~>> flatpak list
Name                                 Application ID                                                 Version            Branch           Installation
Slack                                com.slack.Slack                                                4.12.0             stable           user
Freedesktop Platform                 org.freedesktop.Platform                                       20.08.2            20.08            user
default                              org.freedesktop.Platform.GL.default                                               20.08            user
ffmpeg-full                          org.freedesktop.Platform.ffmpeg-full                                              20.08            user
openh264                             org.freedesktop.Platform.openh264                              2.1.0              2.0              user
Adwaita theme                        org.kde.KStyle.Adwaita                                                            5.15             user
KDE Application Platform             org.kde.Platform                                                                  5.15             user
QGnomePlatform                       org.kde.PlatformTheme.QGnomePlatform                                              5.15             user
QtSNI                                org.kde.PlatformTheme.QtSNI                                                       5.15             user
QGnomePlatform-decoration            org.kde.WaylandDecoration.QGnomePlatform-decoration                               5.15             user
Telegram Desktop                     org.telegram.desktop                                           2.4.7              stable           user

Here’s a verbose output of attempting an update:

~>> flatpak update -v
F: No installations directory in /etc/flatpak/installations.d. Skipping
F: Opening system flatpak installation at path /var/lib/flatpak
F: Opening user flatpak installation at path /home/etenil/.local/share/flatpak
Looking for updates…
F: Calling system helper: GenerateOciSummary
F: Transaction: update fedora:runtime/org.fedoraproject.Platform/x86_64/f33[$old]
F: Fetching summary file for remote ‘flathub’
F: Transaction: update flathub:app/com.slack.Slack/x86_64/stable[$old]
F: Transaction: update flathub:app/org.telegram.desktop/x86_64/stable[$old]
F: Transaction: update flathub:runtime/io.github.quodlibet.QuodLibet.Locale/x86_64/stable[/en]
F: Transaction: update flathub:runtime/org.freedesktop.Platform.GL.default/x86_64/20.08[$old]
F: Transaction: update flathub:runtime/org.freedesktop.Platform.Locale/x86_64/20.08[/en]
F: Transaction: update flathub:runtime/org.freedesktop.Platform.ffmpeg-full/x86_64/20.08[$old]
F: Transaction: update flathub:runtime/org.freedesktop.Platform.openh264/x86_64/2.0[$old]
F: Transaction: update flathub:runtime/org.freedesktop.Platform/x86_64/20.08[$old]
F: Transaction: update flathub:runtime/org.gnome.Platform.Locale/x86_64/3.38[/en]
F: Transaction: update flathub:runtime/org.kde.KStyle.Adwaita/x86_64/5.15[$old]
F: Transaction: update flathub:runtime/org.kde.Platform.Locale/x86_64/5.15[/en]
F: Transaction: update flathub:runtime/org.kde.Platform/x86_64/5.15[$old]
F: Transaction: update flathub:runtime/org.kde.PlatformTheme.QGnomePlatform.Sources/x86_64/5.15[$old]
F: Transaction: update flathub:runtime/org.kde.PlatformTheme.QGnomePlatform/x86_64/5.15[$old]
F: Transaction: update flathub:runtime/org.kde.PlatformTheme.QtSNI.Sources/x86_64/5.15[$old]
F: Transaction: update flathub:runtime/org.kde.PlatformTheme.QtSNI/x86_64/5.15[$old]
F: Transaction: update flathub:runtime/org.kde.WaylandDecoration.QGnomePlatform-decoration/x86_64/5.15[$old]
F: Transaction: update flathub:runtime/org.kde.WaylandDecoration.QGnomePlatform_decoration.Sources/x86_64/5.15[$old]
F: Looking for remote metadata updates for fedora
F: marking op update:runtime/org.fedoraproject.Platform/x86_64/f33 resolved to 90a21a7022cabad0e9f2983fe1df4db107dc9261d0d716b16871892b0d2aba19
F: Looking for remote metadata updates for flathub
F: marking op update:runtime/org.kde.WaylandDecoration.QGnomePlatform_decoration.Sources/x86_64/5.15 resolved to 247bde3cb9d5610ae0d85a571eb48986d7d1d5e4fef9cdda084e8d7637f0f612
F: marking op update:runtime/org.kde.WaylandDecoration.QGnomePlatform-decoration/x86_64/5.15 resolved to 875f62756a2121a39470fa7be717afd93e1a2ddf827ef9f2fee1e0fc9732e701
F: marking op update:runtime/org.kde.PlatformTheme.QtSNI/x86_64/5.15 resolved to 1966fa2a1738e1d84f4f76112915a31275c1f1e925a82cb7a59c7fdbe01ae467
F: marking op update:runtime/org.kde.PlatformTheme.QtSNI.Sources/x86_64/5.15 resolved to 89bdff5ad050cf1ccf22178d7fa1dfd3ec590d3c34c8cadfe5c460e86f2cd610
F: marking op update:runtime/org.kde.PlatformTheme.QGnomePlatform/x86_64/5.15 resolved to 17bd97bbda14093eccb43e10af29d051d82be05d6e498c23352bfaab8f338675
F: marking op update:runtime/org.kde.PlatformTheme.QGnomePlatform.Sources/x86_64/5.15 resolved to ac962a13d5e2f52f5b3284fb2b8237f6d4e9c4dca13279ab2a6433fcaa06e3bd
F: marking op update:runtime/org.kde.Platform/x86_64/5.15 resolved to cf2a5865594034feaa9e8e9f428cc2df09999e389f9078a999dae5bb4dff9218
F: marking op update:runtime/org.kde.Platform.Locale/x86_64/5.15 resolved to 30df97ca4e1db2bb9a4946fbf4586a516558c65e6ed02c39e86857d422846dd2
F: marking op update:runtime/org.kde.KStyle.Adwaita/x86_64/5.15 resolved to 11b7291b21584d0fb4a34898b106730547961a715ecb4039fbf4afae7c0635c2
F: marking op update:runtime/org.gnome.Platform.Locale/x86_64/3.38 resolved to b2997bdc3a2dc923be853bbb4a89890ccada70f13b609a0df6b67b01e9241e2e
F: marking op update:runtime/org.freedesktop.Platform/x86_64/20.08 resolved to 1c2a31fa9eceb92a4d20027b90e63d2b82c62d1a35a1e9dc744322e94bcf8813
F: marking op update:runtime/org.freedesktop.Platform.openh264/x86_64/2.0 resolved to 73f998362a6fc0d57e0c7e83e928d32b0ec14d10d0d94291033976bdcecc6b6b
F: marking op update:runtime/org.freedesktop.Platform.ffmpeg-full/x86_64/20.08 resolved to 280a5447e04802951ac61cab04c0bcd23c23c4f2e706d5943f37ca1d52dfd89f
F: marking op update:runtime/org.freedesktop.Platform.Locale/x86_64/20.08 resolved to 5a5c835bd08d48ed37807cdbf225ae37c3705c3eb10978eeb9e7bc49de87a080
F: marking op update:runtime/org.freedesktop.Platform.GL.default/x86_64/20.08 resolved to 55685c44d7ed51521e57f29399baf95bb06f4a9951de9f88b43ef988ccaa4054
F: marking op update:runtime/io.github.quodlibet.QuodLibet.Locale/x86_64/stable resolved to b245245211618db65b4bafc3b475427b28d82d969a689bc8653936db4eae9dca
F: marking op update:app/org.telegram.desktop/x86_64/stable resolved to b2617625c3edb686c544897610799534d1e935973deeb5c0774efbecf44a2e8b
F: marking op update:app/com.slack.Slack/x86_64/stable resolved to 6e3347a0d10c3f08819c7564155ea5137c6b3b021a18cd6df6d948d353f06d52
F: Transaction: install/update flathub:runtime/org.freedesktop.Platform.GL.default/x86_64/20.08[*]
F: Transaction: install/update flathub:runtime/org.freedesktop.Platform.VAAPI.Intel/x86_64/20.08[$old]
F: Transaction: install/update flathub:runtime/org.freedesktop.Platform.openh264/x86_64/2.0[*]
F: Transaction: install/update flathub:runtime/org.kde.KStyle.Adwaita/x86_64/5.15[*]
F: Transaction: install/update flathub:runtime/org.kde.PlatformTheme.QGnomePlatform.Sources/x86_64/5.15[*]
F: Transaction: install/update flathub:runtime/org.kde.PlatformTheme.QGnomePlatform/x86_64/5.15[*]
F: Transaction: install/update flathub:runtime/org.kde.PlatformTheme.QtSNI.Sources/x86_64/5.15[*]
F: Transaction: install/update flathub:runtime/org.kde.PlatformTheme.QtSNI/x86_64/5.15[*]
F: Transaction: install/update flathub:runtime/org.kde.WaylandDecoration.QGnomePlatform-decoration/x86_64/5.15[*]
F: Transaction: install/update flathub:runtime/org.kde.WaylandDecoration.QGnomePlatform_decoration.Sources/x86_64/5.15[*]
F: Transaction: install/update flathub:runtime/org.kde.Platform.Locale/x86_64/5.15[/en]
F: Transaction: install/update flathub:runtime/org.freedesktop.Platform.GL.default/x86_64/20.08[*]
F: Transaction: install/update flathub:runtime/org.freedesktop.Platform.Locale/x86_64/20.08[/en]
F: Transaction: install/update flathub:runtime/org.freedesktop.Platform.VAAPI.Intel/x86_64/20.08[$old]
F: Transaction: install/update flathub:runtime/org.freedesktop.Platform.openh264/x86_64/2.0[*]
F: Transaction: install/update flathub:runtime/org.freedesktop.Platform.ffmpeg-full/x86_64/20.08[*]
F: marking op install/update:runtime/org.freedesktop.Platform.VAAPI.Intel/x86_64/20.08 resolved to dc5cfaade1c137d475ba3e953cea44a84dbd8a4588e9b24eea7ef7aee6cfc6fa


 1.	   	org.freedesktop.Platform.VAAPI.Intel	20.08	i	flathub	< 11.2 MB

Proceed with these changes to the user installation? [Y/n]: 
Installing…                                                                                                                  F: flatpak_dir_pull: Using commit dc5cfaade1c137d475ba3e953cea44a84dbd8a4588e9b24eea7ef7aee6cfc6fa for pull of ref runtime/org.freedesktop.Platform.VAAPI.Intel/x86_64/20.08 from remote flathub

Installing…                        0%  0 bytes/s
Installing… ████████████████████ 100%F: No checksum specified, getting tip of runtime/org.freedesktop.Platform.VAAPI.Intel/x86_64/20.08 from origin flathub
F: tip resolved to: dc5cfaade1c137d475ba3e953cea44a84dbd8a4588e9b24eea7ef7aee6cfc6fa
Warning: While trying to checkout dc5cfaade1c137d475ba3e953cea44a84dbd8a4588e9b24eea7ef7aee6cfc6fa into /home/etenil/.local/share/flatpak/runtime/org.freedesktop.Platform.VAAPI.Intel/x86_64/20.08/.dc5cfaade1c137d475ba3e953cea44a84dbd8a4588e9b24eea7ef7aee6cfc6fa-407DW0: Opening content object fde90070d1cb81c9f1c69de520689581f3e0a04895c3c52d74fcfcc6ecadc7fe: Couldn't find file object 'fde90070d1cb81c9f1c69de520689581f3e0a04895c3c52d74fcfcc6ecadc7fe'
Installation complete.                                                                                                         
F: fedora:x86_64 appstream age 419 is less than ttl 86400
F: fedora-testing:x86_64 appstream age 18446744073709551615 is greater than ttl 86400
F: flathub:x86_64 appstream age 418 is less than ttl 86400
F: gnome-nightly:x86_64 appstream age 414 is less than ttl 86400