Fedora 40 problem running electron applications

When I want to run for example brave

flatpak run com.discordapp.Discord
Disabling updates already done
bwrap: execvp /app/bin/zypak-helper: No such file or directory
[5 preload-host-spawn-strategy] Failed to let stub process know of exit: Bad file descriptor (errno 9)

My full list

ichal@fedora:~$ flatpak list
Name                                               Application ID                                         Version                           Branch                  Installation
Brave Browser                                      com.brave.Browser                                      1.67.116                          stable                  system
Discord                                            com.discordapp.Discord                                 0.0.56                            stable                  system
Jellyfin Media Player                              com.github.iwalton3.jellyfin-media-player              1.11.1                            stable                  system
Flatseal                                           com.github.tchx84.Flatseal                             2.2.0                             stable                  system
Spotify                                            com.spotify.Client                                         stable                  system
Steam                                              com.valvesoftware.Steam                                                stable                  system
Visual Studio Code                                 com.visualstudio.code                                  1.89.1                            stable                  system
Yubico Authenticator                               com.yubico.yubioath                                    7.0.0                             stable                  system
Flatpak External Data Checker                      org.flathub.flatpak-external-data-checker                                                stable                  system
Freedesktop Platform                               org.freedesktop.Platform                               23.08.20                          23.08                   system
i386                                               org.freedesktop.Platform.Compat.i386                                                     23.08                   system
Mesa                                               org.freedesktop.Platform.GL.default                    24.1.1                            23.08                   system
Mesa (Extra)                                       org.freedesktop.Platform.GL.default                    24.1.1                            23.08-extra             system
Mesa                                               org.freedesktop.Platform.GL32.default                  24.1.1                            23.08                   system
Mesa (Extra)                                       org.freedesktop.Platform.GL32.default                  24.1.1                            23.08-extra             system
openh264                                           org.freedesktop.Platform.openh264                      2.1.0                             2.2.0                   system
openh264                                           org.freedesktop.Platform.openh264                      2.4.1                             2.4.1                   system
Freedesktop SDK                                    org.freedesktop.Sdk                                    23.08.20                          23.08                   system
GNOME Application Platform version 46              org.gnome.Platform                                                                       46                      system
Breeze GTK theme                                   org.gtk.Gtk3theme.Breeze                               6.0.5                             3.22                    system
KDE Application Platform                           org.kde.Platform                                                                         5.15-23.08              system
VLC                                                org.videolan.VLC                                       3.0.21                            stable                  system

try flatpak repair?

The problem was I restored backup of some of home directories and this broken flapak applications.